"F" for 'Frequency' used to be used quite frequently as an alpha tag denoting "Channel" in older radios (especially those with two character displays). So "F1" would be short for 'Frequency 1' aka 'Channel 1.' This is different from modern radio programming which tends to use a letter and a number to denote the bank/channel (or vice versa). So in a modern Motorola radio, "F1" would be in zone F (the 6th bank), mode 1 (the 1st channel on the channel knob).
If Fremont PD has older radios in the patrol cars (like SFPD's back up low bands), it's probably the former. If they were referring to their EBRCS mobile or portable radios, it's probably the latter (where F is a mutual aid/conventional zone).