1) Create a scan list under the scan menu
2) Add that scan list to every personality in its respective 'scan' tab.
3) Put the personalities in a zone
4) Go into the scan list's config and add that channels you want scanned to the scan list.
As for squelch tail elimination stuff, you must know the PLs used, if any, and program them into the RX side.
If they use non-Motorola radios and you still get the squelch crash after transmissions, there's a tab in the personality for "non standard reverse burst"
Since you have the software and cable, trial and error is a fine method of learning the software. Nobody gave me a manual for RSS or CPS. It's not all that hard to figure out unless it's no in English.
-Josh