"Now that ATCS is going away and if not most states have moved away from this system, which was used to monitor train traffic in the area."
To be clear, ATCS isn't actually going away, its implementation physical network layer is changing to use undecipherable packets in a different radio spectrum, or going to fiber optic transmission medium which not detectable without breaching its security.
So ATCS is still there but is slowly shedding unencrypted radio in the 900 Mhz range which ATCS Monitor, the SW package, depends upon.
The system is there, but impossible to use to monitor train traffic where the radio transmissions aren't any longer being radiated.
"What is used now to help track train movement?"
If you mean "what is used by people who foremerly relied on the ATCS Monitor SW package and 900 Mhz radios to track trains?"
It's like the other poster said, we're back to rubbing sticks together by listiening to other radio emissions.
EOT, HOT, DPU, voice, etc are reliable but less exact for determining when the train might arrive. [ Edit: also PTC Mobile channels ]
I also have theorized the design of a system of directional microphones pointing in both north and south directions toward the UP main that goes just east of my residence.
Then I would try analyzing the sound to detect a distance train horn among the other noise then email me or text me.
But right now, I'm not highly motivated because the ATCS Monitor works great with the radios and unencrypted right here.