Are you doing any kind of recording or using replay? I've heard stories that when either of these options are used and power is lost to the radio, it can corrupt a card. Something about not fully complete the write process.I have the same problem I put a new SD card in my radio. It works for about 24 hours and then I woke up this morning and it said corrupted it's been doing it for a while. Is there an issue with the radio or the card?
Are you using a high endurance card? San Disk makes some fairly reliable cards. As time goes along, it is getting difficult to find small enough capacity cards for scanners.