From working in MOC (maintenance operations center) at a large base, we dispatchedOkay a couple of points from someone who worked in the aviation industry. Removing the outside identification from the aircraft does not change the maintenance operations that deal with them. What you are removing is the outside appearance of the aircraft (basically while in flight). Once gear doors are open - aircraft identification marks can become visible. There are lots of other ways that maintenance teams and flight operations people coordinate the aircraft. If you are expecting an F16 to show up and a KC135 pulls up to park at the designated spot - you are beyond any physical identification issues with your operations. Common sense applies in most cases.
Another thing is that the US Army apparently has already started compliance with the process a while ago - and the US Army seems to have a good handle on their operational fleet.
As I said, should be interesting listening to mait. comms., at least for awhile. ie. avionics goes to the wrong plane, they didn't figure it out till the looked at the 781.
Thanks
Joel